Research Staff

Rodoniki Athanasiadou

I’m a Molecular Biologist and Applied Data Scientist with a strong commitment to advancing the integration of machine learning in the fields of healthcare and biomedicine. In August 2023, I assumed the role of Senior Research Associate on Dr. John LaCava’s team at The Rockefeller University, where I lead the dry lab. My primary focus is harnessing the power of machine learning as a dynamic tool for hypothesis generation within the established scientific research framework.

I have a PhD from the University of Edinburgh in Molecular Biology and extensive experience on the application of machine learning in biomedicine both in academia and industry. More details about my professional experience can be found in my LinkedIn profile.

PhD Students

Omar Bringas

I earned my Master’s degree in Mexico and then I joined John’s groups to do my PhD. I am interested in RNA biology and the interactions between proteins and other macromolecules. I am currently studying the interactions between IGF2 binding proteins and LINE-1 retrotransposons. I am also interested in mass spectrometry and data analysis.

Laboratory Management and Research Support Staff

Hua Jiang

I earned an MS degree in Biology from Queens College of The City University of New York (CUNY). I joined the Laboratory of Cellular and Structural Biology at The Rockefeller University in 2006. Since that time, I have been a project coordinator for the National Center for Dynamic Interactome Research.

I started working with John in 2008, when he was a recently-joined post-doctoral associate in the same lab, and we have continued working together ever since. In my capacity on John’s team, I am a Research Specialist working on the biochemical characterization of L1 ribonucleoproteins.

Mohammed Hanzala

In May 2023, I joined the LaCava Lab at the University Medical Center Groningen (UMCG) in the Netherlands as a Mass Spectrometry Researcher, where I applied DIA-proteomics to the LysoIP project, aimed at mapping the proteomic landscape of lysosomes in the gut and understanding their role in inflammatory bowel disease (IBD). In late 2024, I moved to Rockefeller University in New York City as a Research Specialist, where I continue this work and am currently exploring the computational aspects of proteomics.

Jonathan Kittel

Visiting PhD Students

Julia De Souza

Interns

Naji Khanji

A pharmacist by profession with a passion for programming and software development, I joined John's lab as intern as a part of my International Master in Innovative Medicine and am now involved in the dry lab efforts to augment machine learning in the macromolecules.fun pipeline. My primary focus lies in investigating emerging techniques for biomarker discovery and their integration into diagnostic research.

 Max T.W van Velzen

After my bachelor's in Biology and medical laboratory research (life science) in Utrecht, I fell in love with Mass Spectrometry Proteomics and Data analysis. I joined the LaCava lab as part of my thesis project for the MSc Bioinformatics and Systems Biology at VU Amsterdam, regarding the use of AlphaFold to find allosteric effects of Mannoses on E-Cadherin. I am currently extending this thesis work as computational structural proteomics research for the LaCava team.

Edie Frederick

Alumni (alphabetical)

Anastasiya Petrenko - BSc intern; technician

Angelica Ferguson - postdoctoral researcher

Apostolos Mourtzinos - PhD student

Arianna Picozzi - MSc intern

Bao-Han Ly - MSc intern; technician

David Coit - bioinformatician

David Tabb - staff scientist (most awesome of dudes!)

Igor Orlov - staff scientist

Jean-Frédéric Olivier - visiting PhD student

Joan Parets Oliver - MSc intern

Kinga Winczura - visiting PhD student

Lars ter Morsche - MSc intern; technician

Leila Saba - technician; lab manager

Luciano Di Stefano - postdoctoral researcher

Mathias I. Nielsen - postdoctoral researcher

Maria Benitez Guijarro - visiting PhD student

Marko Radovic - MSc intern

Mehrnoosh Oghbaie - postdoctoral researcher

Michal Domanski - visiting PhD student

Nataliia Khoruzhenko - technician

Samira Hozeifi - postdoctoral researcher

Shaoshuai Xie - PhD student

Sylvia van Beem - MSc intern; technician

Yuhui Dou - visiting PhD student